Gaussian Process Regression Models 2

Compare Prediction Intervals of GPR Models

This example fits GPR models to a noise-free data set and a noisy data set. The example compares the predicted responses and prediction intervals of the two fitted GPR models.

Generate two observation data sets from the function g(x)=xsin(x).

rng('default') % For reproducibility
x_observed = linspace(0,10,21)';
y_observed1 = x_observed.*sin(x_observed);
y_observed2 = y_observed1 + 0.5*randn(size(x_observed));

The values in y_observed1 are noise free, and the values in y_observed2 include some random noise.

Fit GPR models to the observed data sets.

gprMdl1 = fitrgp(x_observed,y_observed1);
gprMdl2 = fitrgp(x_observed,y_observed2);

Compute the predicted responses and 95% prediction intervals using the fitted models.

x = linspace(0,10)';
[ypred1,~,yint1] = predict(gprMdl1,x);
[ypred2,~,yint2] = predict(gprMdl2,x);

Resize a figure to display two plots in one figure.

fig = figure;
fig.Position(3) = fig.Position(3)*2;

Create a 1-by-2 tiled chart layout.

tiledlayout(1,2,'TileSpacing','compact')

For each tile, draw a scatter plot of observed data points and a function plot of xsin(x). Then add a plot of GP predicted responses and a patch of prediction intervals.

nexttile
hold on
scatter(x_observed,y_observed1,'r') % Observed data points
fplot(@(x) x.*sin(x),[0,10],'--r')  % Function plot of x*sin(x)
plot(x,ypred1,'g')                  % GPR predictions
patch([x;flipud(x)],[yint1(:,1);flipud(yint1(:,2))],'k','FaceAlpha',0.1); % Prediction intervals
hold off
title('GPR Fit of Noise-Free Observations')
legend({'Noise-free observations','g(x) = x*sin(x)','GPR predictions','95% prediction intervals'},'Location','best')

nexttile
hold on
scatter(x_observed,y_observed2,'xr') % Observed data points
fplot(@(x) x.*sin(x),[0,10],'--r')   % Function plot of x*sin(x)
plot(x,ypred2,'g')                   % GPR predictions
patch([x;flipud(x)],[yint2(:,1);flipud(yint2(:,2))],'k','FaceAlpha',0.1); % Prediction intervals
hold off
title('GPR Fit of Noisy Observations')
legend({'Noisy observations','g(x) = x*sin(x)','GPR predictions','95% prediction intervals'},'Location','best')

Figure contains 2 axes objects. Axes object 1 with title GPR Fit of Noise-Free Observations contains 4 objects of type scatter, functionline, line, patch. These objects represent Noise-free observations, g(x) = x*sin(x), GPR predictions, 95% prediction intervals. Axes object 2 with title GPR Fit of Noisy Observations contains 4 objects of type scatter, functionline, line, patch. These objects represent Noisy observations, g(x) = x*sin(x), GPR predictions, 95% prediction intervals.

When the observations are noise free, the predicted responses of the GPR fit cross the observations. The standard deviation of the predicted response is almost zero. Therefore, the prediction intervals are very narrow. When observations include noise, the predicted responses do not cross the observations, and the prediction intervals become wide.

 
 
 

 

 

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